Each month we produce iTOL annotation files for the INPHARED genomes. These are produced by parsing the Taxonomy data from Genbank files …. only NCBI taxonomy lags behind ICTV taxonomy…..So some of the new families etc havent been updated as of yet.
Below are iTOL annotation files for all phages in the current VMR40 . To allow the latest taxonomy to be rapidly applied to trees in iTOL