Phage Genomes April 2026

We are making some changes to INPHARED updating the code and the output files produced. In the mean time here are links to files produced

Browsable table of data is here

7Apr2026_genomes.fa.gz – included genomes as fasta

7Apr2026_accepted_genomes.gb.gz – gbk files included
7Apr2026_millardlab_website_table.txt.gz – standard data
7Apr2026_phages_downloaded_from_genbank.gb.gz – raw gbk without filtering f

7Apr2026_genomes_excluding_refseq.fa.gz
7Apr2026_itol_family_annotations.txt.gz
7Apr2026_itol_genus_annotations.txt.gz
7Apr2026_itol_host_annotations.txt.gz
7Apr2026_itol_length_annotations.txt.gz
7Apr2026_itol_lowest_taxa_annotations.txt.gz
7Apr2026_itol_node_label_annotations.txt.gz
7Apr2026_itol_subfamily_annotations.txt.gz

7Apr2026_vConTACT2_family_annotations.tsv.gz
7Apr2026_vConTACT2_gene_to_genome.csv.gz
7Apr2026_vConTACT2_genus_annotations.tsv.gz
7Apr2026_vConTACT2_host_annotations.tsv.gz
7Apr2026_vConTACT2_lowest_taxa_annotations.tsv.gz
7Apr2026_vConTACT2_proteins.faa.gz
7Apr2026_vConTACT2_subfamily_annotations.tsv.gz