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Bioinformatics
Bacteriophage Genomes
Finding antibiotic resistance genes and virulence genes in phages
Phage Genome -Oct2021
Phage Genomes – Apr2022
Phage Genomes – Aug2021
Phage Genomes – Dec2021
Phage Genomes – Feb2022
Phage Genomes – Jan2021
Phage Genomes – Jan2022
Phage Genomes – Mar2022
Phage Genomes – Sep2021
Phage Genomes – Nov2021
Bacillus phages
Bacteriophage MASH sketches
Lab Scripts
Colouring Phage ITOL trees
HeatMap
Supplementing and Colouring vConTACT2 Clusters
Lab_server
Calculate_ANI
Filtering phage contigs
Mapping reads to phage contigs
Phage Genome Annotation
Quick phage comparison
Screen
Copying files
Prophage Prediction
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Lab Members
Alumni
Aisha Alhumoudi
Alex Wilcox
Amy Cawthrow
Aurelija Grigonyte
Benjamin Hillyard
Branko Rihtman
Fran Pitt
Ibrahim Besler
Paul Sazinas
Richard Puxty
Tamsin Redgwell
Becky Smith
Christian Harrison
Submitting a Bacteriophage Genome to ENA – Part 1
Submitting a Bacteriophage Genome to ENA – Part 2
Louisa Perry
Lucy Gannon
Beginner Guide to Bacteriophage Genome Assembly 1. Introduction
Beginner Guide to Bacteriophage Genome Assembly 2. Files and workflow
Beginner Guide to Bacteriophage Genome Assembly 3. Trimming and Assembling
Slawomir Michniewski
Andrew Millard
Lab Phage/Culture Stocks
Strain List -Frozen stocks
Vibrio Stocks
Meeting-phage
Protocols
Publications
Research
Antibiotic Resistance and Marine Phages
Bacteriophage Engineering
Cyanophages
EVAL-FARMS
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Amy Cawthrow
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